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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Joe Cloutier | 18th | Jonathan Borrego | Tied for 10th | 16th |
| First Basemen | Tim Morgan | 24th | Matt Griffin | 2nd | 20th |
| Second Basemen | Matt Dahlk | 10th | Nate Parish | 12th | 9th |
| Third Basemen | Jeff Gifford | 7th | Jose Alfaro | Tied for 8th | 6th |
| Shortstops | Brad Coates | 1st | Jorge Gallegos | 6th | 1st |
| Left Fielders | Sean Johnson | 24th | Unpei Sakamoto | 14th | 21st |
| Center Fielders | Alex Velasco | 12th | Tied for 22nd | 22nd | |
| Right Fielders | Chris Paterson | 7th | Carlos Ayala | 16th | 16th |
| Starting Pitchers | Malik Combs | 18th | Franklin Lucero | 3rd | 8th |
| Relievers | Jon Aguilera | 8th | Alex Martinez | 2nd | 2nd |
| Closers | Ashton Roberge | 24th | Tom Hughes | 23rd | 24th |
